质粒名称: | NLS-mCherry-NES reporter (pDN160) |
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出品公司: | 爱迪基因 |
目录编号: | 72660 |
存储实验室: | Barbara Di Ventura, Roland Eils |
载体骨架基本信息 |
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载体名称: | pcDNA3.1 (-) |
载体出品公司: | -- |
载体抗性: | 氨苄青霉素 |
空载体大小: | 6250 bp |
完整质粒大小: | -- |
载体修饰: | -- |
载体类型: | 哺乳细胞表达 |
筛选标记: | -- |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | NLS-mCherry-NES |
物种来源: | -- |
插入大小: | -- |
基因突变: | -- |
GenBank编号 | -- |
启动子 | CMV |
标签/融合蛋白: | -- |
克隆方法: | -- |
5' 克隆位点: | -- |
3' 克隆位点: | -- |
5' 测序引物 | CMV-F |
3' 测序引物 | BGH-rev |
文献引用方法 |
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材料和方法部分: | NLS-mCherry-NES reporter (pDN160) was a gift from Barbara Di Ventura & Roland Eils (Addgene plasmid # 72660 ; http://n2t.net/addgene:72660 ; RRID:Addgene_72660) |
参考文献部分: | Optogenetic control of nuclear protein export. Niopek D, Wehler P, Roensch J, Eils R, Di Ventura B. Nat Commun. 2016 Feb 8;7:10624. doi: 10.1038/ncomms10624. 10.1038/ncomms10624 PubMed 26853913 |
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载体基本信息
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载体序列
LOCUS NLS-mCherry-NES reporter (pDN160) 6250 bp ds-DNA circular SYN 06-AUG-2018 DEFINITION NLS-mCherry-NES 17 reporter for light-inducible nuclear export block with pDN157 and pDN158. ACCESSION . VERSION . KEYWORDS NLS-mCherry-NES reporter (pDN160) SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 6250) AUTHORS Niopek D, Wehler P, Roensch J, Eils R, Di Ventura B TITLE Optogenetic control of nuclear protein export. JOURNAL Nat Commun. 2016 Feb 8;7:10624. doi: 10.1038/ncomms10624. PUBMED 26853913 REFERENCE 2 (bases 1 to 6250) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 6, 2018 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..6250 /organism="synthetic DNA construct" /mol_type="other DNA" primer_bind complement(44..63) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" enhancer 235..614 /label=CMV enhancer /note="human cytomegalovirus immediate early enhancer" promoter 615..818 /label=CMV promoter /note="human cytomegalovirus (CMV) immediate early promoter" primer_bind 769..789 /label=CMV-F /note="Human CMV immediate early promoter, forward primer" primer_bind 863..882 /label=T7 /note="T7 promoter, forward primer" promoter 863..881 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" CDS 931..1635 /codon_start=1 /product="monomeric derivative of DsRed fluorescent protein (Shaner et al., 2004)" /label=mCherry /note="mammalian codon-optimized" /translation="VSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGT QTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNFE DGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALKG EIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERAE GRHSTGGMDELYK" primer_bind complement(1073..1091) /label=mCherry-R /note="mCherry, reverse primer" primer_bind 1341..1360 /label=mCherry-F /note="mCherry, forward primer" primer_bind complement(1844..1861) /label=BGH-rev /note="Bovine growth hormone terminator, reverse primer. Also called BGH reverse" polyA_signal 1850..2074 /label=bGH poly(A) signal /note="bovine growth hormone polyadenylation signal" rep_origin 2120..2548 /direction=RIGHT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(2207..2226) /label=F1ori-R /note="F1 origin, reverse primer" primer_bind 2417..2438 /label=F1ori-F /note="F1 origin, forward primer" primer_bind complement(2557..2577) /label=pBABE 3' /note="SV40 enhancer, reverse primer for pBABE vectors" promoter 2562..2891 /label=SV40 promoter /note="SV40 enhancer and early promoter" rep_origin 2742..2877 /label=SV40 ori /note="SV40 origin of replication" primer_bind 2804..2823 /label=SV40pro-F /note="SV40 promoter/origin, forward primer" CDS 2958..3752 /codon_start=1 /gene="aph(3')-II (or nptII)" /product="aminoglycoside phosphotransferase from Tn5" /label=NeoR/KanR /note="confers resistance to neomycin, kanamycin, and G418 (Geneticin(R))" /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF" primer_bind complement(3012..3031) /label=Neo-R /note="Neomycin resistance gene, reverse primer" primer_bind 3622..3641 /label=Neo-F /note="Neomycin resistance gene, forward primer" polyA_signal 3926..4047 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" primer_bind complement(3963..3982) /label=SV40pA-R /note="SV40 polyA, reverse primer" primer_bind 4017..4036 /label=EBV-rev /note="SV40 polyA terminator, reverse primer" primer_bind complement(4096..4112) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind complement(4096..4112) /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" primer_bind complement(4109..4131) /label=M13/pUC Reverse /note="In lacZ gene" protein_bind 4120..4136 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." promoter complement(4144..4174) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 4189..4210 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." primer_bind complement(4327..4344) /label=L4440 /note="L4440 vector, forward primer" rep_origin complement(4498..5083) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(4578..4597) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS complement(5254..6114) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 5877..5896 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(6115..6219) /gene="bla" /label=AmpR promoter ORIGIN 1 gacggatcgg gagatctccc gatcccctat ggtgcactct cagtacaatc tgctctgatg 61 ccgcatagtt aagccagtat ctgctccctg cttgtgtgtt ggaggtcgct gagtagtgcg 121 cgagcaaaat ttaagctaca acaaggcaag gcttgaccga caattgcatg aagaatctgc 181 ttagggttag gcgttttgcg ctgcttcgcg atgtacgggc cagatatacg cgttgacatt 241 gattattgac tagttattaa tagtaatcaa ttacggggtc attagttcat agcccatata 301 tggagttccg cgttacataa cttacggtaa atggcccgcc tggctgaccg cccaacgacc 361 cccgcccatt gacgtcaata atgacgtatg ttcccatagt aacgccaata gggactttcc 421 attgacgtca atgggtggag tatttacggt aaactgccca cttggcagta catcaagtgt 481 atcatatgcc aagtacgccc cctattgacg tcaatgacgg taaatggccc gcctggcatt 541 atgcccagta catgacctta tgggactttc ctacttggca gtacatctac gtattagtca 601 tcgctattac catggtgatg cggttttggc agtacatcaa tgggcgtgga tagcggtttg 661 actcacgggg atttccaagt ctccacccca ttgacgtcaa tgggagtttg ttttggcacc 721 aaaatcaacg ggactttcca aaatgtcgta acaactccgc cccattgacg caaatgggcg 781 gtaggcgtgt acggtgggag gtctatataa gcagagctct ctggctaact agagaaccca 841 ctgcttactg gcttatcgaa attaatacga ctcactatag ggagacccaa gctggctagc 901 atggccgcag caaagcgcgt gaagctggac gtgagcaagg gcgaggagga taacatggcc 961 atcatcaagg agttcatgcg cttcaaggtg cacatggagg gctccgtgaa cggccacgag 1021 ttcgagatcg agggcgaggg cgagggccgc ccctacgagg gcacccagac cgccaagctg 1081 aaggtgacca agggtggccc cctgcccttc gcctgggaca tcctgtcccc tcagttcatg 1141 tacggctcca aggcctacgt gaagcacccc gccgacatcc ccgactactt gaagctgtcc 1201 ttccccgagg gcttcaagtg ggagcgcgtg atgaacttcg aggacggcgg cgtggtgacc 1261 gtgacccagg actcctccct gcaggacggc gagttcatct acaaggtgaa gctgcgcggc 1321 accaacttcc cctccgacgg ccccgtaatg cagaagaaga ccatgggctg ggaggcctcc 1381 tccgagcgga tgtaccccga ggacggcgcc ctgaagggcg agatcaagca gaggctgaag 1441 ctgaaggacg gcggccacta cgacgctgag gtcaagacca cctacaaggc caagaagccc 1501 gtgcagctgc ccggcgccta caacgtcaac atcaagttgg acatcacctc ccacaacgag 1561 gactacacca tcgtggaaca gtacgaacgc gccgagggcc gccactccac cggcggcatg 1621 gacgagctgt acaagggtgg atctggaggt tcaggtggaa gtgagggagt catgctgatt 1681 aagaaaactg cagaaaatat tgacgagctg gccaaggccc tgcccgacct gaacctggac 1741 tagctcgagc ggccgccact gtgctggata tctgcagaat tccaccacac tggactagtg 1801 gatccgagct cggtaccaag cttaagttta aaccgctgat cagcctcgac tgtgccttct 1861 agttgccagc catctgttgt ttgcccctcc cccgtgcctt ccttgaccct ggaaggtgcc 1921 actcccactg tcctttccta ataaaatgag gaaattgcat cgcattgtct gagtaggtgt 1981 cattctattc tggggggtgg ggtggggcag gacagcaagg gggaggattg ggaagacaat 2041 agcaggcatg ctggggatgc ggtgggctct atggcttctg aggcggaaag aaccagctgg 2101 ggctctaggg ggtatcccca cgcgccctgt agcggcgcat taagcgcggc gggtgtggtg 2161 gttacgcgca gcgtgaccgc tacacttgcc agcgccctag cgcccgctcc tttcgctttc 2221 ttcccttcct ttctcgccac gttcgccggc tttccccgtc aagctctaaa tcgggggctc 2281 cctttagggt tccgatttag tgctttacgg cacctcgacc ccaaaaaact tgattagggt 2341 gatggttcac gtagtgggcc atcgccctga tagacggttt ttcgcccttt gacgttggag 2401 tccacgttct ttaatagtgg actcttgttc caaactggaa caacactcaa ccctatctcg 2461 gtctattctt ttgatttata agggattttg ccgatttcgg cctattggtt aaaaaatgag 2521 ctgatttaac aaaaatttaa cgcgaattaa ttctgtggaa tgtgtgtcag ttagggtgtg 2581 gaaagtcccc aggctcccca gcaggcagaa gtatgcaaag catgcatctc aattagtcag 2641 caaccaggtg tggaaagtcc ccaggctccc cagcaggcag aagtatgcaa agcatgcatc 2701 tcaattagtc agcaaccata gtcccgcccc taactccgcc catcccgccc ctaactccgc 2761 ccagttccgc ccattctccg ccccatggct gactaatttt ttttatttat gcagaggccg 2821 aggccgcctc tgcctctgag ctattccaga agtagtgagg aggctttttt ggaggcctag 2881 gcttttgcaa aaagctcccg ggagcttgta tatccatttt cggatctgat caagagacag 2941 gatgaggatc gtttcgcatg attgaacaag atggattgca cgcaggttct ccggccgctt 3001 gggtggagag gctattcggc tatgactggg cacaacagac aatcggctgc tctgatgccg 3061 ccgtgttccg gctgtcagcg caggggcgcc cggttctttt tgtcaagacc gacctgtccg 3121 gtgccctgaa tgaactgcag gacgaggcag cgcggctatc gtggctggcc acgacgggcg 3181 ttccttgcgc agctgtgctc gacgttgtca ctgaagcggg aagggactgg ctgctattgg 3241 gcgaagtgcc ggggcaggat ctcctgtcat ctcaccttgc tcctgccgag aaagtatcca 3301 tcatggctga tgcaatgcgg cggctgcata cgcttgatcc ggctacctgc ccattcgacc 3361 accaagcgaa acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc 3421 aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc gccaggctca 3481 aggcgcgcat gcccgacggc gaggatctcg tcgtgaccca tggcgatgcc tgcttgccga 3541 atatcatggt ggaaaatggc cgcttttctg gattcatcga ctgtggccgg ctgggtgtgg 3601 cggaccgcta tcaggacata gcgttggcta cccgtgatat tgctgaagag cttggcggcg 3661 aatgggctga ccgcttcctc gtgctttacg gtatcgccgc tcccgattcg cagcgcatcg 3721 ccttctatcg ccttcttgac gagttcttct gagcgggact ctggggttcg aaatgaccga 3781 ccaagcgacg cccaacctgc catcacgaga tttcgattcc accgccgcct tctatgaaag 3841 gttgggcttc ggaatcgttt tccgggacgc cggctggatg atcctccagc gcggggatct 3901 catgctggag ttcttcgccc accccaactt gtttattgca gcttataatg gttacaaata 3961 aagcaatagc atcacaaatt tcacaaataa agcatttttt tcactgcatt ctagttgtgg 4021 tttgtccaaa ctcatcaatg tatcttatca tgtctgtata ccgtcgacct ctagctagag 4081 cttggcgtaa tcatggtcat agctgtttcc tgtgtgaaat tgttatccgc tcacaattcc 4141 acacaacata cgagccggaa gcataaagtg taaagcctgg ggtgcctaat gagtgagcta 4201 actcacatta attgcgttgc gctcactgcc cgctttccag tcgggaaacc tgtcgtgcca 4261 gctgcattaa tgaatcggcc aacgcgcggg gagaggcggt ttgcgtattg ggcgctcttc 4321 cgcttcctcg ctcactgact cgctgcgctc ggtcgttcgg ctgcggcgag cggtatcagc 4381 tcactcaaag gcggtaatac ggttatccac agaatcaggg gataacgcag gaaagaacat 4441 gtgagcaaaa ggccagcaaa aggccaggaa ccgtaaaaag gccgcgttgc tggcgttttt 4501 ccataggctc cgcccccctg acgagcatca caaaaatcga cgctcaagtc agaggtggcg 4561 aaacccgaca ggactataaa gataccaggc gtttccccct ggaagctccc tcgtgcgctc 4621 tcctgttccg accctgccgc ttaccggata cctgtccgcc tttctccctt cgggaagcgt 4681 ggcgctttct catagctcac gctgtaggta tctcagttcg gtgtaggtcg ttcgctccaa 4741 gctgggctgt gtgcacgaac cccccgttca gcccgaccgc tgcgccttat ccggtaacta 4801 tcgtcttgag tccaacccgg taagacacga cttatcgcca ctggcagcag ccactggtaa 4861 caggattagc agagcgaggt atgtaggcgg tgctacagag ttcttgaagt ggtggcctaa 4921 ctacggctac actagaagaa cagtatttgg tatctgcgct ctgctgaagc cagttacctt 4981 cggaaaaaga gttggtagct cttgatccgg caaacaaacc accgctggta gcggtttttt 5041 tgtttgcaag cagcagatta cgcgcagaaa aaaaggatct caagaagatc ctttgatctt 5101 ttctacgggg tctgacgctc agtggaacga aaactcacgt taagggattt tggtcatgag 5161 attatcaaaa aggatcttca cctagatcct tttaaattaa aaatgaagtt ttaaatcaat 5221 ctaaagtata tatgagtaaa cttggtctga cagttaccaa tgcttaatca gtgaggcacc 5281 tatctcagcg atctgtctat ttcgttcatc catagttgcc tgactccccg tcgtgtagat 5341 aactacgata cgggagggct taccatctgg ccccagtgct gcaatgatac cgcgagaccc 5401 acgctcaccg gctccagatt tatcagcaat aaaccagcca gccggaaggg ccgagcgcag 5461 aagtggtcct gcaactttat ccgcctccat ccagtctatt aattgttgcc gggaagctag 5521 agtaagtagt tcgccagtta atagtttgcg caacgttgtt gccattgcta caggcatcgt 5581 ggtgtcacgc tcgtcgtttg gtatggcttc attcagctcc ggttcccaac gatcaaggcg 5641 agttacatga tcccccatgt tgtgcaaaaa agcggttagc tccttcggtc ctccgatcgt 5701 tgtcagaagt aagttggccg cagtgttatc actcatggtt atggcagcac tgcataattc 5761 tcttactgtc atgccatccg taagatgctt ttctgtgact ggtgagtact caaccaagtc 5821 attctgagaa tagtgtatgc ggcgaccgag ttgctcttgc ccggcgtcaa tacgggataa 5881 taccgcgcca catagcagaa ctttaaaagt gctcatcatt ggaaaacgtt cttcggggcg 5941 aaaactctca aggatcttac cgctgttgag atccagttcg atgtaaccca ctcgtgcacc 6001 caactgatct tcagcatctt ttactttcac cagcgtttct gggtgagcaa aaacaggaag 6061 gcaaaatgcc gcaaaaaagg gaataagggc gacacggaaa tgttgaatac tcatactctt 6121 cctttttcaa tattattgaa gcatttatca gggttattgt ctcatgagcg gatacatatt 6181 tgaatgtatt tagaaaaata aacaaatagg ggttccgcgc acatttcccc gaaaagtgcc 6241 acctgacgtc //
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